species:   Scscl
pid:       PID1742
parent:    Ssc-milR-218
paralog:   
locus:     NW_001820835.1:1063099-1063192
matures:   ['UGAUUGAAUUGGAAGUAGAUC', 'UCGAUUGCCUGUGAAUCGGUCUG']
srr:       SRR12527899
genome:    /Users/jax/+Genomes/Fungal_genomes/Scscl.GCF_000146945.2_ASM14694v2.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Xia2020-rh.SRR12527899.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Xia2020-rh.SRR12527899.cram NW_001820835.1:1063099-1063192

0 out of bounds
0 alignments
0 proper strand
0 stranded perfect matches

   ***********************                                        *************************   
GAACUUAUCCUGAUUGAAUUGGAAGUAGAUCUCAAGUUGGAACAAGAAGGUUUCUAGCUCUUAUCGAUUGCCUGUGAAUCGGUCUGGUAGGGCG
...((((((..((((((((.((.(((.(((....(((((((((......).))))))))...))).))).)).))...)))))).))))))...
----------UGAUUGAAUUGGAAGUAGAUC--------------------------------------------------------------- l=21 a=0 c
---------------------------------------------------------------UCGAUUGCCUGUGAAUCGGUCUG-------- l=23 a=0 c*
----------UGAUUGAAUUGGAAGUAGAUC--------------------------------------------------------------- l=21 a=0 ma
---------------------------------------------------------------UCGAUUGCCUGUGAAUCGGUCUG-------- l=23 a=0 ma*


No alignments to locus

mb-01011
ax-1011011
ku-01
ss-000110011100
fn-001
